Set-up for a by-trait analysis downstream

Need to restructure the data from per-trial by regrouping by trait.

nestDesignsDetectedByTraits(indata, traits)

Arguments

indata

data.frame with experimental designs detected, output from detectExptDesigns

traits

character vec, names of traits to include

Value

Details

NOTICE: This function is part of a family of functions ("cassavabase_pheno_pipeline") developed as part of the NextGen Cassava Breeding Project genomic selection pipeline. For some examples of their useage:

• IITA_2021GS (should be first use of this package)

• NRCRI_2021GS

• TARI_2020GS

• IITA_2020GS

See also

Other cassavabase_pheno_pipeline: calcPropMissing(), curateTrialOneTrait(), curateTrialsByTrait(), detectExptDesigns(), fitMultiTrialModel(), makeTrialTypeVar(), nestByTrials(), nestForMultiTrialAnalysis(), nestTrialsByTrait(), readDBdata(), renameAndSelectCols()